Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPLVTTKKCHLKSIVHELLWFLKGSTNIAYLKEHGVSIWDEWADE------------NGDLGPVYGYQWRSWPAPD----------------------------------GRHIDQIANLMAMLKKNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVAD--GKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEV-----------KDLFDFRFEDFELVGYEAHPHIKAPVAV |
| 3V8H Chain:A ((5-318)) | MKQYLDLVRTILDTGTWQSN--GIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELVGFLRATRSAAEFRALGCKVWDANANENAQWLANPYRRGADDLGDVYGVQWRRWPGYKVLDAHADAQIADATSRGFRIVARFEEGGADKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWNPAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLTGYSPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLELAERVPDYAKTGKYEPQWLERVEPSDFTLVGYRHH--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207747 for 2033 contacts (-102.2/contact) +
2D Compatibility (PS) -27148 + (NN) -14566 + (LL) 856
1D Compatibility (HY) -23200 + (ID) 5500
Total energy: -277305.0 ( -136.40 by residue)
QMean score : 0.599
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