Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPHCETLLLEPIEGVLRITLNRPQSRNAMSLAMVGELRAVLAAVRDDRSVRALVLRGADGHFCAGGDIKDMAGARAAGAEAYRTLNRAFGSLLEEAQAAPQLLVALVEGAVLGGGFGLACVSDVAIAAADAQFGLPETSLGILP-AQIAPFVVRRIGLTQARRLALTAARFDGREALRLGLVHFCEADADALEQRLEETLEQLRRCAPNANAATKALLLASESGELGALLDDAARQFAEAVGGAEGSEGTLAFVQKRKPVWAQ
2EJ5 Chain:A ((4-258))
-----YETIRYEVKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDL-------DH----GDVLRSRYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEEAAALGLATKVIPL-SDWEEEVKQFAERLSAMPTKAIGLIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRKPLFQG
General information:
TITO was launched using:
RESULT:
Template:
2EJ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137758 for 2024 contacts (-68.1/contact) +
2D Compatibility (PS) -26652 + (NN) -10286 + (LL) 1036
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -189210.0 ( -93.48 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_2EJ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EJ5-query.scw
PDB file :
Tito_Scwrl_2EJ5.pdb
: