Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNLKERCFTDNELNDNFVGIRSINNDLQICFPLGFDISDNKNIRADVKKLVSILLEYNKTIACENLLNNKNEIINSNFPLTAYKNVIEYFLSHGYYSENKSYYENNAKGRINFSKTIKKNRPIIQTFNNKNSFVYTRFQVKRKMINENELITAINKYCVHEAFSKFGFVFSSFMPPKFNLPTDKNYCIYLLENKLNNTFNDDKKILFQSMKNILLQDDNILDKTDFKFGTHHFYVVWERMIDRAFGIKNKEVYFPKTKWNLRCSNQNPDYLLQPDSIMLFDDKIYILDAKYYKYGISGVASDLPNSASIIKQIVYGEYAAKLETKKEVYNIFLMPFNRFN-NPLKLGNIFENIGFANGEWRDNLKQYENIQGILIDTKFLMQNYNKKSNDLLKLLAKNVEETKNNF |
19HC Chain:A ((1-292)) | -----------AALEPTDSGAPS----AIVMFPVG----EKPNPKGAAMKPVVFN-----HLIHEKKIADCETCHHTGDPVS---------CSTCHTVEGKAEGDYITLDRAMHATDIAA-RAKGNTPTSCVSCHQSETKERRECAG------------CHAITTP---------------KDDEAWCATCHDITPSMTPSEMQKGIAGTL--LPGDNEALAAETVLAEAT-----------------------------------------VAPVSPMLAPYKVVI-DALADKYEPSDF-THRRHLTSLMESIKDDKLAQAFHDKPEILCATCHHRSPLSLTPPKCGSCHTKEIDAADPGRPNLMAAYHLECMGCHKGMAVARPRDTDCTTCHKAAA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 19HC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1168 for 1976 contacts (0.6/contact) +
2D Compatibility (PS) -30111 + (NN) -2298 + (LL) 7552
1D Compatibility (HY) 4800 + (ID) 2550
Total energy: -21439.0 ( -10.85 by residue)
QMean score : 0.142
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