Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFANKILTEKDTDQIRFSILASGS--SGNATLVETGDQKILIDCGLSGKKME---GLFAQV-------GRDMNDLDAILITHEHSDHIKGLGVLARK--YKLPIYANAKTWKAMDNMIGEVS-------------S-------DQKFQFDMETVKNFG-SMQVESFGVSHDAIEPMFYIFHKG--NKKFVMITDTGYVSDRMKGH----IAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI |
| 3AF5 Chain:A ((187-397)) | ------------RWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILG-SAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGG--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75691 for 1328 contacts (-57.0/contact) +
2D Compatibility (PS) -18272 + (NN) -2378 + (LL) 7396
1D Compatibility (HY) -12800 + (ID) 1900
Total energy: -103645.0 ( -78.05 by residue)
QMean score : 0.439
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