Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MQKVVIIGGGIVGASAAYLLSKEN--VQVTLIDSDE-AGQATRAAAGIICPWLSKRRNKYWYELAKNSAAFYKELAETLEGDTGRDSGYKQVGVLALRQTEEKLAELFNLARERRLDAEVMGEVAKLSEAETKQRFPLVKSG-------FGSVYVSGAARVNGGLFCETLLYAAKENGVKI--KAGRAHFSSDGE----VVIDGEKEHYDKLILATGAWLKDLLQDAGFQTDVLAQKGQLLELNFSEFQTDDWPVILPPSAKSIVPFDNGKIIVGATHEKAAGFNTEPTAEGKAEILTEVSQFMEGDLASKVAHVSVGTRPYTPDFTPIIGQLPGFESVFLANGLGASGLTTGPYVGRILADLALGNASDFVLENYEPSKYISR----------- |
| 1X31 Chain:B ((1-402)) | ADLLPEHPEFLWNNPEPKKSYDVVIVGGGGHGLATAYYLAKNHGITNVAVLEKGWLAGGNMARNTTII---RSNYLWDESAGIYEKSLKLWEELPEEL----EYDFLFSQRGVLNLAHTLGDVRESIRRVEANKFNG---VDAEWLTPEQVKEVCPIINTGDNIRYPVMGATYQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFLKDGEKVTGVKTTRGTILAGKVALAGAGHSSVLAELAGFELPIQSHPLQALVSELFE-PVHPTVVMSNHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIEEQMAAAVELFPIFARAHVLRTWGGIVDTTMDASPIISKTP-IQNLYVNCGWGTGGFKGTPGAGYTLAHTIAHDEPHKLNAPFALERFETGHLIDEHGAAAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158684 for 3195 contacts (-49.7/contact) +
2D Compatibility (PS) -39001 + (NN) -13759 + (LL) 444
1D Compatibility (HY) -6800 + (ID) 3900
Total energy: -221700.0 ( -69.39 by residue)
QMean score : 0.484
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