Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQSLAKQVIHQAVEVNAQDIYIIPKGDCYELYMRI-DDERRFID-----VFEFNRMASLISHFKFVAGMNVGEKRRSQLGSCDYELSEGRLVSLRLSSVGDYRG--QESLVIRILYSGHQD-----LKYWF------DN-IKQMKEVLGTRGLYLFSGPVGSGKTTLMYQLASEVFKNKQIITIEDPVEIKNDK---MLQLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVM-VFSTIHAKSISGVYDRLIELGVNYQELENSLKLIAYQRLIGGGSLIDFETGNFKKHSSDKWNRQVDILAEEGHISKKQAQVEKIIPQETTESSPTF |
| 2PT7 Chain:A ((36-288)) | --------FGDFLKMENITEICYNGNK---VVWVLKNNGEWQPFDVRDRKAFSLSRLMHFARCCASFKKKTIDNYE---NPILSSNLANG--ERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFG--GNITSADCLKSCLRMRPDRIILGELRSSE-AYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIK----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133649 for 1581 contacts (-84.5/contact) +
2D Compatibility (PS) -24260 + (NN) -7832 + (LL) 3772
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -172469.0 ( -109.09 by residue)
QMean score : 0.432
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