Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGKVNFHDIEILSDDKGAPLITKEPFNGKSFVSISHSGNYAQASVILEEEK
1FTH Chain:A ((3-118))
MIVGHGIDIEELASIESAVTRHEGFAKRVLTALEMERFTSLK-GRRQIEYLAGRWSAKEAFSKAMGTGISKLGFQDLEVLNNERGAPYFSQAPFSGKIWLSISHTDQFVTASVILEEN-
General information:
TITO was launched using:
RESULT:
Template:
1FTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35990 for 796 contacts (-45.2/contact) +
2D Compatibility (PS) -12842 + (NN) -8348 + (LL) 24
1D Compatibility (HY) -13600 + (ID) 3000
Total energy: -73756.0 ( -92.66 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1FTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FTH-query.scw
PDB file :
Tito_Scwrl_1FTH.pdb
: