Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNNNFLLSYACFPNKTRGRYFKEQEDENRSCFQRDRDRIIHSNAFRKLEYKTQVFIN---YEHDYYRTRLTHSLEVAQIARSIARRLGL--------DEDITECIALAHDLGHPPFGHTGENALKRAVQDLNLDNEKYEFDHNVQAIRILTYLEQKHADFDGMNLSWEVVEGVAKHNGPLLGRNAVSYTNNQLLLEYNEKYNLKLEEFSSIEAQVAS---IADDIAYSVHD-LDDELRANLVTIEDLLN-IPLIGKTFKDVESRYSELPQNKLIHESLSRTIGMMISDVVSQTEKNIEDYKIKSVEDVRSLNKMLVTFSPEVANATKEVKKFNMEKIYRSYKLNRTMNKAKRIVEELFQCFYENPRLLPIEWNKLAHKFQRSVVICDYISGMTDRFAIHEHRRIFDTSYEMTSF |
2Q14 Chain:A ((24-246)) | ------------------------------------LYDIVRHPLLQRLTRIKQVGLSSVVYPGA-QHTRFQHSLGAFYLMSEAITQLTSKGNFIFDSEAEAVQAAILLHDIGHGPFSHVLEDTIVQ------------GVSHEEISLMLMERMNKEM----NG-QLSLAIQIFKDE-Y-----------------------------PKRFLHQLVSGQLDMDRLDYLRRDSFYTGVTEGNIGSARIIKMLD---------------------V-------AD---DRLV--IE--------S---------KGI-----YSIENFLTARRLMYWQVYLHKTSVAYERMLISTLLRAKELASQGVELFASPALHFFLYNDINHTEFHNNPDCLENFIQLDDNDIWTALKVWSNH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54820 for 1543 contacts (-35.5/contact) +
2D Compatibility (PS) -22107 + (NN) -5655 + (LL) 8208
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -80274.0 ( -52.02 by residue)
QMean score : 0.457
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