Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEYEQWKEILSAIDKETDLSKDNVIAKIKEKLKALDSSTYEEWKETNFDVNHLFAVKYGLLHLAVHNNLKNVVNALFGVEGIDVNAVDKDKHTSLHLAVEKGHIGIVNSLLEVKADVNVEDENGKTPLYTAVQFGCKGEIEVLIGKMMIGALIRAGANVNAEDKDKCTPLHFAARCGRKEIVQTLIEAGANVNAANEDKRTPSHIATQFCRKEIVKVLVEAGADVRAADKYGITPLHFA---DGAETVKTLIGAGANVNVVDKDKRTPLHWVKGAE---TAETLIEAGVNVNTIDKGKRNPLHMAARCSCEGVIKTLIGKRADLLSKNNDSKIPSNFNKSHYIIRRVKSLWSEERMKRLDQQSKVSFVVFGLTILFGTATATTLFVTETIAFGPYPIIGTVVIVAAAAWVVSCAADKILEPSTKIDEMKAVQVDENMQKAPLNLST |
| 1N11 Chain:A ((40-364)) | -------------------------------------------------PNVSNVKVETPLHMAARAGHTEVAKYLL-QNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL---------LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH--QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLHRMSFPETVDE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132409 for 2889 contacts (-45.8/contact) +
2D Compatibility (PS) -32774 + (NN) -3080 + (LL) 5532
1D Compatibility (HY) -2800 + (ID) 4400
Total energy: -169931.0 ( -58.82 by residue)
QMean score : 0.435
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