Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMG-GLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAGSQHVD--ELHGTLNRFYC--NACHK----SYTKSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFK-GDNLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
| 3ZGO Chain:C ((43-259)) | ------------ERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALA-KELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESPPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85687 for 1527 contacts (-56.1/contact) +
2D Compatibility (PS) -21807 + (NN) -4926 + (LL) 2984
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -127786.0 ( -83.68 by residue)
QMean score : 0.386
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