Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKINTTGGQIHGITQ-DGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQPDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHND--QTKKPVIIYFYGGSFENGHGTAELYQPAHL--VQNNDIIVITCNYRLGALGYLDWSYFN-KDFHSNNGLSDQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPD--IEPYFHKVVLLSGALRLD-TLKSARNKAQYFQKMMRD-Y--LDTDDVTSLSTDDILMLMAKLKQSRGP-SKGLDLIYAP-IKTDYIQND--------YPTTKPIFACYTKDEGDIYITSEQKKLSPQRFIDIME-L--------ND--IPLKYEDV-----QTA-KQQSLAITHCYFKQPMKQFLQHLNIQDS-N-AQLWLAEFAWHDTSS-AHYRSAYHILDMVFWFGNLQILAAH-QYPTTAHLKFLSRQMQNDLANFAKSGKM---------PWPMYHNERRYYRTYQ |
| 1UKC Chain:A ((11-492)) | PVINLGYARYQGVRLEAGVDEFLGMRYASPPIGDLRFRAPQDPPANQTLQSATEYGPICIGLDEEES--------PGDISEDCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNAN--YNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGD-LNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVSEMEFQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFIKVPVLVGDDTDEGSNFAYNASS---SADVSRFFKNNYPNLTSQQLNEINQVYPRGKLLPRHAAYFGASSAAYGDATFTCPGNHVASSAA---RYLPNSVWNYRVNIIDESNIAGGIGVPHTFELPAIFGAGSTGTLSSDSSYLTYNAAIIPVTMHYFISFVQTLNPNTYRYATAPEWNTWGNGQRLRL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193513 for 3773 contacts (-51.3/contact) +
2D Compatibility (PS) -45189 + (NN) -14110 + (LL) 1324
1D Compatibility (HY) -7200 + (ID) 4700
Total energy: -263388.0 ( -69.81 by residue)
QMean score : 0.434
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