Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERNEVLKKVEAAMPNARFKHTLGVEKAAVELAEHYHM-DVEKARITALLHDYAKYYDDDKARKI-------IEDEGYD-PRLLSFHHSLWHAPVGAYLAEKEFGITDTEILEAIRLHTTGS--A-TMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLDEAMLFALSNTITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY
3HC1 Chain:A ((117-242))
---------------STLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVGFALAKR-WSLN-EFICDTILYHHDIEAVPYKQAAIVAMVAFADEYCT------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HC1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40275 for 833 contacts (-48.3/contact) +
2D Compatibility (PS) -12458 + (NN) -6722 + (LL) 5948
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -59457.0 ( -71.38 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3HC1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HC1-query.scw
PDB file :
Tito_Scwrl_3HC1.pdb
: