Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTKDELYDAMKDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLTQSGLTEKSFKSQLKYNLLVQKATEANTDTSDKTLKKYYETWQPDITVSHILVAD-ENKAKEVEQKLKDGEK-FADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALK-----NKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKDAFKDFDGSSSSDSDSSK |
| 1EQ3 Chain:A ((36-131)) | ---------------------------------------------------------------------------------------------------------------------------------------NAVKVRHILCEKH-GKIMEAMEKLKSGM-RFNEVAAQYSEDK-ARQ-GGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMVEGRK----------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -27483 for 616 contacts (-44.6/contact) +
2D Compatibility (PS) -10450 + (NN) -11782 + (LL) 12328
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -46687.0 ( -75.79 by residue)
QMean score : 0.556
|
|
|