Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNIELKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSEGYKDFSEIAIYGNTEEPISPCGACRQVMVEFFNKNAKVTLIAKNGKTVETTVGELLPYSFVDLK
1UWZ Chain:A ((1-128))
MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEATALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSED
General information:
TITO was launched using:
RESULT:
Template:
1UWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55273 for 1037 contacts (-53.3/contact) +
2D Compatibility (PS) -13997 + (NN) -6168 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 3300
Total energy: -87538.0 ( -84.41 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1UWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UWZ-query.scw
PDB file :
Tito_Scwrl_1UWZ.pdb
: