Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIHIEAKQGEIADKILLPGDPLRAKFIAENFLEDAVCFNTVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDYGVKTLIRVGTAGAINPDIHVRELVLAQAAATNSNIIRNDWPEFDFPQIADFKLLDKAYHIAKEMDITTHVGSVLSSDVFYSNQPDRNM--ALGKLGVHAIEMEAAALYYLAAQHNVNALAMMTISDNLNNPEEDTSAEERQTTFTDMMKVGLETLISE
1PR6 Chain:B ((5-234))
---HINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYS--PDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHI----Q-TTAAERQTTFNDMIKIALESVLLG
General information:
TITO was launched using:
RESULT:
Template:
1PR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166959 for 1925 contacts (-86.7/contact) +
2D Compatibility (PS) -24184 + (NN) -7677 + (LL) 152
1D Compatibility (HY) -26400 + (ID) 5700
Total energy: -230768.0 ( -119.88 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1PR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PR6-query.scw
PDB file :
Tito_Scwrl_1PR6.pdb
: