Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHYQTIIIGAGAAGIGFGSAMQRLG--LTNFLIIEKGHIGESFLRWPRTTQFITPSFTTNGFGFPDLNAVIPDTSPAFSFEKEHLSGVEYARYLQLVAAHYNLPIQNETSVLSIDKRDSLFVIKTS----KGDFSADYLIMATGEFQNPNTIDIKGADL---GMHYGQVDN-------FHIKSDNPFIIIGGNESACDALTHLVYLGNQVELYTDTFGRKESNPDPSISLSPLTKERLKHIQDHKKEYYSISEGKKAIEIKQIGKQYQVTFDDGSTAESFHKPILSTGFLNTCHLIDGIA-LFEYDKNQLPIVTEDDESTIVNNCFLIGPSLRQRDTI------FCYIYKFRQRFVPVINHIAQREGIILDEDTLEFFKENQMYLDNLACCDVNCDC |
| 3ICS Chain:A ((35-354)) | -GSRKIVVVGGVAGGASVAARLRRLSEED-EIIMVERGEYISF-A--NCGL--------------PYY-----------IGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA--KPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-------IDYEMAAYVHEHMKN--HDVELVFEDGVDALEENG--AVVRLKSGSV-IQTDMLILAIGVQPESSL--AKGAGLALGVRGTIKVNEKFQ-TSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ICS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139545 for 2438 contacts (-57.2/contact) +
2D Compatibility (PS) -31862 + (NN) -9297 + (LL) 1988
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -189466.0 ( -77.71 by residue)
QMean score : 0.357
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