Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEHHIPKNSIITVAGTVGVGKSTLTKTLAKRLGFKT-SLEEVDH------NPYLEKFYHDFERWSFHLQIYFLAERFKEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTSLFEAMVMTPY-FPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWEEMHTRYENWISGF---NACPVLKLRIEDYDLLNDENSIENIVDQIASVIHDNQKK |
| 2VP4 Chain:A ((17-209)) | -----GTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPT-NKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIE--ESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADL--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44878 for 1375 contacts (-32.6/contact) +
2D Compatibility (PS) -19474 + (NN) -3720 + (LL) 2556
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -75216.0 ( -54.70 by residue)
QMean score : 0.471
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