Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEHHIPKNSIITVAGTVGVGKSTLTKTLAKRLGFKT-SLEEVDH------NPYLEKFYHDFERWSFHLQIYFLAERFKEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTSLFEAMVMTPY-FPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWEEMHTRYENWISGF---NACPVLKLRIEDYDLLNDENSIENIVDQIASVIHDNQKK
2VP4 Chain:A ((17-209))-----GTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPT-NKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIE--ESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADL---------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44878 for 1375 contacts (-32.6/contact) +
2D Compatibility (PS) -19474 + (NN) -3720 + (LL) 2556
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -75216.0 ( -54.70 by residue)
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_2VP4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VP4-query.scw
PDB file : Tito_Scwrl_2VP4.pdb: