Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGDIQLKNRVVLAP-MAGVCNSAFRLTVKEFGAGLVCAE-MVSDKAI-LYNNARTMGMLYIDEREKPLSLQIFGGKKETLVEAAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAVNKPVTVKMRMGWDEDHIFAVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKMAVCKLHLDRLIDLKGENVAVREM-RKHAAWYLKGVKGNANVRNEI-NHCETREEFVQLLDA-FTVEVEAKELQNAKVG |
| 1VHN Chain:A ((5-309)) | ----------VKVGLAPMA-GYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLP---QPHERNVAVQIFGSEPNELSEAARILSEK--YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEI--YRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEKR--IPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSE-PSREEILRTFERHLELLIKTKGERKAVV-EMRKFLAGYTKDLKGARRFREKVMK-----IEEVQILKEMFYNFIKEVE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171633 for 2546 contacts (-67.4/contact) +
2D Compatibility (PS) -32138 + (NN) -11586 + (LL) 2800
1D Compatibility (HY) -16000 + (ID) 5050
Total energy: -233607.0 ( -91.75 by residue)
QMean score : 0.575
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