Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANYPKELPAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALITGG--DSGIGRAVSVAYAKEGADIAIVY-KDEHEDAEETKKRVEQEGVK---CLLIAGDV--GEEEFCNEAVEKTVKELGGLDILVNNAG----EQHPKESIKDITSEQLHRTFKTNFYSQFYLTKKAIDYLKP-GSAIINTTSINPYVGNPTLID-YTATKGAINAFTRTMAQALVK-DGIRVNAVAPGPIWTPLIPATFPE--------------ETVAQFGQDTPMGRPGQPVEHVGCYVLLA--SDESSYMTGQTLHVNGGNFVTT
1YBV Chain:A ((14-283))-------------DAIPGPLG-------------PQSASLEGKVALVTGAGR--GIGREMAMELGRRGCKVIVNYA-NSTESAEEVVAAIKKN---GSDAACVKANVGV--VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKD-VT----PEEFDRVFTINTRGQFFVAREAYKHLE-IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAI-DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL--RRVG-LPIDIARVVCFLASN-DGGWVTGKVIGIDGGACM--


General information:
TITO was launched using:
RESULT:

Template: 1YBV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1271 -132667 -104.38 -555.09
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -104.38
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_1YBV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YBV-query.scw
PDB file : Tito_Scwrl_1YBV.pdb: