Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAG-GIWTE----DASRMEAM-SLDYFLSYPRLFWPKFKELFQMKMSGSFEPNEGHLLLAELEKQGKQVDIFTQNIDGLHKKAG--SRHVYELHGSIQTAACPACGARYD----LPHLLEREVPECTAAGNNGDICGTVLKTDVVLFGDAV-MHFDTLYEKLDQADLLLVIGTSLEVAPARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGMKK
4BV3 Chain:A ((23-211))-----------QRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELY----PGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCP-------VCTGVVKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEP-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4BV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 782 -72929 -93.26 -414.37
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -93.26
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_4BV3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BV3-query.scw
PDB file : Tito_Scwrl_4BV3.pdb: