Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MPGVQDRVIVVTGAGGGLGREYALTLAGEGASVVVNDLGGARDGTGAGSAMADEVVAEIRDKGGRAVANYDSVATEDGAANIIKTALDEFGAVHGVVSNAGILRDGTFHKMSFENWDAVLKVHLYGGYHVLRAAWPHF-REQSYGRVV-VATSTSGLFGNFGQTNYGAAKLGLVGLINTLALEGAKYNIHANALAPIAATR-MTQDIL-PPEVLEKLTPEFVAPVVAYLCTEECADNASVYVVGGGKVQRVALFGNDGANFDKP--P-SVQDVAARWAEITDLSGAKIAGFKL-------------- |
| 1GZ6 Chain:A ((3-303)) | SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVAN---YDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDH-MKKQNYGRIIMT-ASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTET--VMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNASKPKSIQESTGGIIEVLHKID |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153452 for 2281 contacts (-67.3/contact) +
2D Compatibility (PS) -30545 + (NN) -13025 + (LL) 392
1D Compatibility (HY) -22800 + (ID) 6850
Total energy: -226280.0 ( -99.20 by residue)
QMean score : 0.540
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