Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVPAKKKQQQGERSRESILDATERLMATKGYAATSISDIRDACGLAPSSIYWHFGSKEGVLAAMMERGAQRFFAAIPTWDEAHGPVEQRSERQLTELVSLQSQHPDFLRLFYLLSMERSQDPAVAAVVRRVRNTAIARFRDSITHLLPSDIPPGKADLVVAELTAFAVALSDGVYFAGHLEPDTTDVERMYRRLRQALEALIPVLLEET
5D18 Chain:A ((12-79))
-----------GERSRESILDATERLMATKGYAATSISDIRDACGLAPSSIYWHFGSKEGVLAAMMERGAQRFFAAIPT-----------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5D18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29341 for 413 contacts (-71.0/contact) +
2D Compatibility (PS) -7514 + (NN) -1398 + (LL) 11568
1D Compatibility (HY) -8000 + (ID) 3400
Total energy: -38085.0 ( -92.22 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_5D18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5D18-query.scw
PDB file :
Tito_Scwrl_5D18.pdb
: