Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDESSVRTPKALPDGVSQATVGVRGGMLRS-GFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAA--GAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQG-RVLGGAILGDREYIDGPVQKL--MRHTGPAMSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRALS |
| 5DX5 Chain:A ((3-396)) | ------------NIKKMGFATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAASGMGAIAASLWSALKSGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDVSNLDEVKNALKPNTKVVYLETPANPTLKVTDIRKISNMVHESNKECFVFVDNTFCTPYIQRPLELGADVVVHSATKYLNGHGDVI-AGFAVGKEEFINQ-VKLFGIKDMTGSVTGPFESFLIIRGMKTLQLRMEKHCKNAMEVAKFLESHPAVEKVYYPGLESFKYYQLAREQMKLPGAMISFELKG----GVEEGKIVMNNVKLATLAVSLGDSETLIQHPASMTHSPYTAEERKAAGISDGLVRLSVGLEDAEDIIDDLKQALD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5DX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -224689 for 3451 contacts (-65.1/contact) +
2D Compatibility (PS) -42690 + (NN) -26351 + (LL) 760
1D Compatibility (HY) -30400 + (ID) 7250
Total energy: -330620.0 ( -95.80 by residue)
QMean score : 0.481
|
|
|