Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGFGLRLAEAKAR-RGPLCLGIDPHPELLRGWDLATTADGLAAFCDICVRAFADF-AVVKPQVAFFESYGAAGFAVLERTIAELRAADVLVLADAKRGDIGATMSA-YATAWVGDSPLAADAVTASPYLGFGSLRPLLEVAAAHGRGVFVLAATSNPEGAAVQNAAADGRSVAQLVVDQVGAANEAAGPGPGSIGVVVGATAPQAPDLSAFTGPVLVPGV---------GVQGGRPEALGGL-GGAASSQLLPAVAREVLRAGPGVPELRAAGERMRDAVAYLAAV |
| 3G3D Chain:A ((70-305)) | --PVASKLLRLMQKKETNLCLSADVSL---------------ARELLQLADALGPSICMLKTHVDILNDFTLDV---MKELITLAKCHEFLIFEDRKFADIGNTVKKQYEGGIFKIAS-WADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDY-------TRAAVRMAEE------HSEFVVGFISGSRV-----SMKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRG----SD-IIIVGRGIISAADRLE----AAEMYRKAAWEA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137825 for 1897 contacts (-72.7/contact) +
2D Compatibility (PS) -24417 + (NN) -9087 + (LL) 3628
1D Compatibility (HY) -9200 + (ID) 2600
Total energy: -179501.0 ( -94.62 by residue)
QMean score : 0.483
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