Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKLQLRAVVADRRLDVEFSVSAGEVLAVLGPNGAGKSTALHVIAGLLRPDAGLVRLGDRVLTDTEAGVNVATHDRRVGLLLQDPLLFPHLSVAKNVAFGPQCRRGMFGSGRARTRASALRWLREVNAEQFADRKPRQLSGGQAQRVAIARALAAEPDVLLLDEPLTGLDVAAAAGIRSVLRSVVARSGCAVVLTTHDLLDVFTLADRVLVLESGTIAEIGPVADVLTAPRSRFGARIAGV---NLVNGTIGPDGSLRTQSGAHWYGTPV---QDLPTGHEAIAVFPPTAVAVYPEPPHG--SPRNIVGLTVAEVDTRGPTVLVRGHDQPGGAPGLAACITVDAATELRVAPGSRVWFSVKAQEVALHPAPHQHASS |
| 1V43 Chain:A ((22-370)) | -------FGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTY------LPPKDRNISMVFQ------HMTVYENIAFPL--KK----FPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAPEMNILEVSVGDGYL-E-GRGFRIELPQ-MDLLKDYVGKTVLFGIRPEHMTVEGV----HMKRTARLIGKVDFVEALGTDTILHVKF---GDELVKVKLPG----HIPIEPGREVKVIMDLDMIHVFDKDTEK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189981 for 2497 contacts (-76.1/contact) +
2D Compatibility (PS) -35568 + (NN) -18409 + (LL) 1528
1D Compatibility (HY) -18800 + (ID) 4350
Total energy: -265580.0 ( -106.36 by residue)
QMean score : 0.464
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