Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSGSLQFTVLRAVNPATDAQRESMLREPGFGKYHTDHMVSIDYAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIPE-LPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFIFATEPGLGVRPAT--QYRYLLIASPAGAYFK--GGIAPVSVWVSTEYVRACPGG-TGAAKFGGNYAASLLAQAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAIDAGFAVEERRIDIDEWQKKAAAGEITEVFACGTAAVITPVARVRHGASEFRIADGQPGEVTMALRDTLTGIQRGTFADTHGWMARLG |
| 1IYE Chain:A ((5-307)) | --------------------------------------------KADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKG-PVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNL--------TSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSS-WNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVN--GYISEGAGENLFEVKD-G---VLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLA------DEVFMSGTAAEITPVRSVDG-I---QVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -185976 for 2508 contacts (-74.2/contact) +
2D Compatibility (PS) -32501 + (NN) -14519 + (LL) 3272
1D Compatibility (HY) -17200 + (ID) 5050
Total energy: -251974.0 ( -100.47 by residue)
QMean score : 0.392
|
|
|