Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAA--RPGQIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLFGIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVSGAAAACDFHTASSWEFEPLDTDVFPAVELARQAGVAGGCMTAVYNAANEEAAAAFLAGRIGFPAIVGIIADVLHA-ADQWAVEPATVDDVLDAQRWARERAQRAVSGMASVAIASTAKPGAAGRHASTLERS |
3A06 Chain:A ((3-372)) | -----------ERTLVILGATGSIGTQTLDVLKKV-KGIRLIGISF-HSNLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVMEP----EVEKVVLTASGGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELFELPFEKIEVKIHREGLVHGAVVLPDGNVKMVVSPPDMRIPISYALFYPRRVALE--P-FFLRTISLSFEDPDPEKYPAFFLLKEIKD-SYALRTAFNAADEVAVEAFLKGRIRFGGIHRVIEKTLEEFQGY--PQPRTLDDVERIHFEAIKKAERVTEWLS----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211370 for 3204 contacts (-66.0/contact) +
2D Compatibility (PS) -39756 + (NN) -15135 + (LL) 1448
1D Compatibility (HY) -25600 + (ID) 6700
Total energy: -297113.0 ( -92.73 by residue)
QMean score : 0.463
|
|
|