Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDVDWNMLRGNATQAAAGAYVPYSRF-AVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGGGRLLALACVDGH-GSVLMPCGRCRQVLLEHGGSELLIDHP--V--RPRRLGDLLPDAFGLDDLPRERR
3OJ6 Chain:A ((27-155))
-LSAAGQNLIDTATSVING--IPVSDFYSVASAAISDDGRVFSGVNVYH--FNGGPCAELVVLGVAAAAGATKLTHIVAIANEGRGILSPCGRCRQVLADLHP-GIKAIVIGKEGPKMVAVEELLPSIYAWDKDY----
General information:
TITO was launched using:
RESULT:
Template:
3OJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76960 for 923 contacts (-83.4/contact) +
2D Compatibility (PS) -13348 + (NN) -6012 + (LL) 984
1D Compatibility (HY) -5600 + (ID) 1900
Total energy: -102836.0 ( -111.41 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_3OJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OJ6-query.scw
PDB file :
Tito_Scwrl_3OJ6.pdb
: