Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIPAFHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGL--RTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQ---AALDAARAVLDAAPGVAVDYLELRDIGLGPMPLN--GSGRLLVAARLGTTRLLDNIAIEIGTFAGTDRPDGYRAILESHWRN |
3Q12 Chain:A ((3-285)) | ---------AMLIIETLPLLRQQIRRWRQEGKRIALVPTMGNLHEGHMTLVDEAKTRA-DVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRHGADLVFAPAAADIYPAGLEKQTYVDVPALSTILEGASRPGHFRGVSTIVSKLFNLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPTVRAKDGLALSSRNGYLTEEERQIAPQLSKIMWALAEKMALGERQIDALLEEAAAQLL-RVGFTPDELFIRDAETLQPLTVDSQQAVILMAAWLGKARLIDNQLVDL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168096 for 2272 contacts (-74.0/contact) +
2D Compatibility (PS) -30950 + (NN) -21585 + (LL) 988
1D Compatibility (HY) -23200 + (ID) 6150
Total energy: -248993.0 ( -109.59 by residue)
QMean score : 0.764
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