Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALVVQKYGGSSVADAERIRRVAERIVATKKQGNDVVVVVSAMG-------DTTDDLLDLAQQVCP-APPPRELDMLLTAGERISNAL-----VAMAIESLGAHARSFTGSQAGVITTGTHGNAKIIDVT-----------------------PGRLQTALEEGRVVLVAGFQGVSQDTKDVTTLGRGGSDTTAVAMAAALGADVCEIYTDVDGIFS-ADPRIVRNARKLDTVTFEEMLEMAA-CGAKVLMLRCVEYARRHNIPVHVR-SSYSDRPGTVVVGSIKDVPMEDPILTGVAHDRSEAKVTIVG--LPDIPGYAAKVFRAVA-DADVNIDMVL-QNVSKVEDGKTDITFTC-SRDVGPAAVEKLDSLRNEIGFSQLLYDDHI-GKVSLIGAG-MRSHPGVTATFCEALAAVGVNIE-L-ISTSEIRISVLCRDTELDKAVVALHEAFGLGGDEEATVYAGTGR |
| 3TVI Chain:A ((4-438)) | --IVVTKFGGSSLADSNQFKKVKGII---DSDANRKYIIPSAPGKRTNKDYKITDLLYLCNAHVKNGIPFDDVFKLISQRYTEIVSELNIDMDIAYYLEKVKKNIEN-GASSDYAASRGEYLNGVILAKYLNAEFIDAAEVIFFDKCFDEKKSYEKIKEKVLSCNKAVIPGFYGSSFN-GDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSG-FLMADPRIVENPKTISKISYKELRELSYMLHEEAI-----FPVKDSGIPINIKNTNKPSDPGTLILSDTHKEINLGTI-TGIAGKKNFTVIAIEKALLNSEVGFCRKILSILEMY---GVSFEHMPS------GVDSVSLVIEDCKLDGKCDKIIEEIKKQCNPDSIEIHP-NMALVATVGTGMAKTK-GIANKIFTALSKENVNIRMIDQGSSEINVIVGVETVDFEKAVKSIYNAFN--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205381 for 3013 contacts (-68.2/contact) +
2D Compatibility (PS) -42125 + (NN) -24267 + (LL) 3044
1D Compatibility (HY) -23200 + (ID) 4550
Total energy: -296479.0 ( -98.40 by residue)
QMean score : 0.533
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