Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPPIDDPFGTPAGGGNGSPPDDRTMIMPRPGGRAPEPAGGPRGGDPYTPPPMASLAPLSGRGDGLNPLEQAAGPLLAM-LTRLRNTIAHPAPASLRAQLLGYLRQFEEKARQAGVAPDEVMLA-RYVLCTALDEAVLSTPWGSTSDWGKQSLLITLHNEAWGGEKVFQLLEHCLQNPHQRLHLLELLYLCTSLGFEGRYRVMHDGRSQLEALRERTAAVIRSTRGEYEHELSPHWRGLSVMRDRLSQYLPPWVGIAIGLALLLALLFGLRMKLAADAEPVFKRIHAIGEIPVQAIDRPAVQPRVIERPRLARFLADDIKAQRVAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPIATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTAEGRSDTEPVATNASAEGRARNRRVEITVFAEGAQ |
| 3U66 Chain:A ((6-178)) | -----------------------------------------------------------------ISRAEQIFYPGWLMVSQLRSGQPVEDGKALYRRACQLVKQAREELAEAGF-SQKSSDIMLYAFCALLDESVLNREWR---TWQQDPLQAHFFGTLNAGEELWERIREQLKLPAPDVAVLTCLCRTLQLGFTGQYRSQDDER--REDVIRALTARVPAFTFAQDAPVVVRAPGYR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87446 for 1151 contacts (-76.0/contact) +
2D Compatibility (PS) -18262 + (NN) -14606 + (LL) 15076
1D Compatibility (HY) -4800 + (ID) 1700
Total energy: -111738.0 ( -97.08 by residue)
QMean score : 0.538
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