Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHQRIASIGLGLTLALGGSAQAAGQLNVVSWSGY----FSPQLLEKFEKESGIRVTVDSYDSNETLLAKLK--QGGAGYDVAIPSQQFVPILVKEALLERFDPAAEPYYAN-LLDNLKKPAWDPEGAYSVPFIWGTTSVVLDGARYAG--PADSYAVLYQPPEELRGRINMFDSVSEVVDMASLYLGIPLCSADPKQMQRVLELLKAQKPFVKTYSSKAG-SIRENLAAGEVDMSMFWGGSSMRARELKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAFLAQPENAALTQNFLKHQSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAIRLADRLWTNLMR |
| 3RPW Chain:A ((31-316)) | ---------------------QSNVVIMQDPGGGYGDALRKVMYDPFEKETGIKVVTVQEAR-SGPRIKAQAEAGKAQWDLTFIFDQET-KLLGDCCLADIDYSKLSESAHKTLAAMPD---NLKRKKGVALQVIGVGLVYNKDKFKGDKAPQTWADFWDVK-KFPGRRCMPAWPRFTFEAALMADGVTKDKLYPIDMDRALKKLKEIKPHVVKWW-TTAAQPPQLILDGEADMCLAYTGSMSKLALEGAPIDLTFNQ--GFVYYDFFSIPKGAPNYDNALKLLSWRLDPKRAAQLTSTFPVALPSKVVFDAATDKNIARYWANNPENVAKAIEWSPDFWGAPSPAGNSTNEEY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115318 for 2239 contacts (-51.5/contact) +
2D Compatibility (PS) -29911 + (NN) -19051 + (LL) 1392
1D Compatibility (HY) -4800 + (ID) 2800
Total energy: -170488.0 ( -76.14 by residue)
QMean score : 0.404
|
|
|