Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRI-RPRFYEPDV-Q-----------------RMAA---------PLGELFAAVGVRFVQG-SAQRIDVAGKRVEYRDAEGTLAQLDYDRLVLAAGSGVWRPASVAGID-A----AFDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAGGGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAIGA-SMGADLSGLIAEASAELGVEWCLGRSVAAVDAE----GVTLDDGQRIEAKTVVWTVGVRAST-LTGQIPGERDA-QGRLHVDRNLKVLGLDDVYATGDVARAATDDLGNHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA |
| 1M6I Chain:A ((10-372)) | SHVPFLLIGGGTAAFAAARSIRARDP-----GARVLIVSEDPELPYMRPPLSKELWFSPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLND----GSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKIS---------REVKSITIIGGGFLGSELACALGRKARA-----LGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGA---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204678 for 2506 contacts (-81.7/contact) +
2D Compatibility (PS) -32105 + (NN) -7363 + (LL) 6372
1D Compatibility (HY) -10800 + (ID) 3450
Total energy: -252024.0 ( -100.57 by residue)
QMean score : 0.425
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