Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQAR-----QSPAAQA--AAAPTAALAAPAADATRMLAPT---PVTTPAPRERVTLWQGE-LRS-REGAQGIPEYLAQVE-PALLDTLALGQ----VLEMSLPGRERPLQARLASTHNSAGLPVWRGGLVDGDE-AESLTVVRGSLETHINVATLDGSYSIIVDN-------RSGKTRVIDENDIAARSDPHGDHV----DAPLAEL-PPMPPPAQG----------------------------- |
| 4DO7 Chain:A ((3-289)) | ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEARIAAVVGWEDLRAPQLAERVAEWRGTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFERQLPDVQAFCARHDAHWLVLDHAGKPALAEFDTALARWRAALRELAALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAASYDEVASLVERWAESRLSAAERSALWGGTAARCYALP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3478 for 1602 contacts (-2.2/contact) +
2D Compatibility (PS) -22551 + (NN) -2967 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 2750
Total energy: -38546.0 ( -24.06 by residue)
QMean score : 0.143
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