Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLRPASPRNEILATLGRFRPALRSVALFTAVINLLMLAPSLYMLQVYDRVLGSGNHMTLLMLTLMVLGLYLLLGALEWVRSLVVIRLGGQLDMQLNQRIYDASFRASLERGEQAAGQALNDLTSLRQFLTGNALFAFFDAPWFPLYLLVIFLFSPWLGLLALAGALLLVLLAWVNESRSREPLAEAGQLSILATQQASANLRQAETLAAMGMLPAMRARWFAQHQAFLARQNLGSERSAAIGATSKGVRLALQSLVLGLGAWLAVDGLITPGMMIAGSILMGRVLSPIDQLIAVWRQWSGARQAYQRLARLLEENPPAALGM---PLPAPRGALRVERLCAAAPGREQALLQDLGFALEPGEALGVIGPSGSGKSTLARLLVGAWQPLSGAVRLDGADLRQWSAAALGPHIGYLAQDVQLFAGSIAENIARFAE-VDAEKVVAAARLAGVHDLVLRLPQGYDTRLGDGGAGLSGGQRQRIGLARALYGRPALIVLDEPNASLDEAGEAALAEAIAAMRRQGSSLVLVTHKPAVLALTDKLLLLHGGRLQRFGATAEVLASASPPAAAAPAPAPAPTRPTPAFGFGYRPGPGMPVGGVPGGAAR |
| 3NH6 Chain:A ((19-279)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHMFIDMENMFDLLKEETEVKDLPGAGPLRFQKGRIEFENVHFSYADG-RETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCA-NRTTIVVAHRLSTVVNADQILVIKDGCIVERGRHEALLSRG------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162030 for 1954 contacts (-82.9/contact) +
2D Compatibility (PS) -27987 + (NN) -16325 + (LL) 26752
1D Compatibility (HY) -19200 + (ID) 4250
Total energy: -203040.0 ( -103.91 by residue)
QMean score : 0.443
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