Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTVKTVRELRAAVARARSEGKRIGFVPTMGNLHAGHAALVKKAGERADFVVVSIFVNPLQFGPSEDLDTYPRTLAADQERLLEAGCHLLFTPTVEEMYPDGMDGQTRIHVP-GVSEGLCGASRPGHFEGVATVVSKLLNMVQPDLALFGEKDFQQLAVIRKLVRDLNLPVQIFGEPTVRAADGLALSSRNGYLDEQQRAAAPAIYRTLRQLGERIRAGAEDFPALLADARQALEQAGLRPDYLEIREPISLRPGVPGDRQLVILAAAYLGSTRLIDNLSVHLD
3N8H Chain:A ((4-260))MIIADNIKQFHSIRNSL-IKQQKIGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASLDVDVLFNPSEKDIYPDGNL--LRIEPKLEIANILEGKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQRQPSGLPLSSRNKNLTSTDIEIANKIYEILRQDDFSNLE----------ELTNKINSTGAKLQYIQK-------------LNNRIFLAFYIGKVRLIDNFLKET-


General information:
TITO was launched using:
RESULT:

Template: 3N8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143760 for 2035 contacts (-70.6/contact) +
2D Compatibility (PS) -28783 + (NN) -16262 + (LL) 612
1D Compatibility (HY) -18000 + (ID) 4950
Total energy: -211143.0 ( -103.76 by residue)
QMean score : 0.600

(partial model without unconserved sides chains):
PDB file : Tito_3N8H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N8H-query.scw
PDB file : Tito_Scwrl_3N8H.pdb: