Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRG-ESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
1SLH Chain:B ((29-153))
-----------RLDPGLPLPSRAHDGDAGVDLYS--AEDVELAPGRRALVRTGVAVAVPF-GMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEA-------------
General information:
TITO was launched using:
RESULT:
Template:
1SLH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87962 for 818 contacts (-107.5/contact) +
2D Compatibility (PS) -12926 + (NN) -3269 + (LL) 804
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -113403.0 ( -138.63 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_1SLH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SLH-query.scw
PDB file :
Tito_Scwrl_1SLH.pdb
: