Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEQKDKYRPCVGIMLFNK-QGHVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDKAKIIAK--NKDW--IYYNLPEEVIPTCWNGRYSGQKQRWFLMKFYGEGKDININYTDHPEFKEWRWQSVDNLVAGAI-PFKKEVYKTVIEEFSSQIKVSIIK
2O1C Chain:A ((2-148))
-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDV-VAEQLTLIDCQRTVEFEIFSHL-RHRYAPGVTRNTESWFCLALPHE---RQIV---FTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN-----------
General information:
TITO was launched using:
RESULT:
Template:
2O1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40131 for 1047 contacts (-38.3/contact) +
2D Compatibility (PS) -15247 + (NN) -7964 + (LL) 1540
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -67052.0 ( -64.04 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_2O1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O1C-query.scw
PDB file :
Tito_Scwrl_2O1C.pdb
: