Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEILIAGGSGFLGKQIIKAALTKGHKVAYLSRHEGKGDIFKDPRLTYIRGDITEADKIHLEDRTFDILIDCIGAIKPNQ--------LDELNVKATQKAVALCHKNQIPKLVYISANSG-----------------------Y-SAYIKSKRKAEQIIKA----SGLDYLFVRPGLMYGEERPLS----IFQAKCIKLF-S---HLPFLGIVVQKVFPTKVVIVAEAIVTTLRKKPTQKILSIEELNNK |
2C5A Chain:A ((30-264)) | LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91990 for 1545 contacts (-59.5/contact) +
2D Compatibility (PS) -21054 + (NN) -15770 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 1450
Total energy: -133064.0 ( -86.13 by residue)
QMean score : 0.515
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