Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKTTKNLLITEINKILPE--DSQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEG-SNKRCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKDDIRDYKQDEVNNLMSMLSKSEIENYIDNLFKQALDNLGELSGDTNYLYNLLNQVKRDD |
3UCA Chain:A ((20-299)) | --------EVDQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGKSALKATKIIADAAGSDGMIGGQIVDIINEDKE---------------------------------EISLKELDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDVVG---NNYITIFGLEECKKKCVNITEECIEILSSIKGNTEPLKVLTMKLLERK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185034 for 2109 contacts (-87.7/contact) +
2D Compatibility (PS) -27632 + (NN) -11005 + (LL) 2380
1D Compatibility (HY) -20000 + (ID) 4500
Total energy: -245791.0 ( -116.54 by residue)
QMean score : 0.581
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