Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNINNRIGIYPGTFDPITFGHIDIIKRACKLVDRLIIGVAENINKHTTFDAKLRTSMAENEIKRLEIDVDVVSFNGLLVKFAKEQNASVIIRGLRAVSDFDYEFQMSWVNYKLLPEIETIFLPASEDTQFISSSFVKEIARLGESVSKFVSVGVQKELINLNRIGSE
1QJC Chain:A ((2-157))
-----KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHL-GNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA----
General information:
TITO was launched using:
RESULT:
Template:
1QJC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104030 for 1233 contacts (-84.4/contact) +
2D Compatibility (PS) -16480 + (NN) -4601 + (LL) 380
1D Compatibility (HY) -14800 + (ID) 3450
Total energy: -142981.0 ( -115.96 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1QJC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QJC-query.scw
PDB file :
Tito_Scwrl_1QJC.pdb
: