Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSD---VRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGK---VLYRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHSVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFL--SPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQ--EDHVSMGTTAARHGYQIIENARRVLAIECVIALQAAELKGVEG---------LSPKTRRKYEEFRSIV--PSITHDRQFHKDIEAVAQYLKQSIYQTTACH-------------- |
| 2NYF Chain:A ((24-566)) | SIVTVGDRNLTIDEVVNVARHGTQVRLTDN------------------ADVIRGVQASCDYINNAVETAISREQAAELQTNLIWFLKSGAGNKLSLADVRAAMLLRANSHLYGASGIRLELIQRIETFLNAGVTPHVYEFGSIG---DLVPLSYITGALIGLDPSFTVDFDGKEMDAVTALSRLGLPKLQLQPKEGLAMMNGTSVMTGIAANCVYDAKVLLALTMGVHALAIQGLYGTNQSFHPFIHQCKPHPGQLWTADQMFSLLKDSSLVREE-----QDRYSLRCLAQFIGPIVDGVSEITKQIEVEMNSVTDNPLIDVENQVSY--HGGNFLGQYVGVTMDRLRYYIGLLAKHIDVQIALLVSPEFSNGLPPSLVGNSDRKVNMGLKGLQISGNSIMPLLSFYGNS-LADRFPTHAEQFNQNINSQGYISANLTRRSVDIFQNYMAIALMFGVQAVDLRTYKMKGHYDARTCLSPNTVQLYTAVCEVVGKPLTSVRPYIWNDNEQCLDEHIARISADIAGGGLIVQAVEHIFSSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200443 for 4139 contacts (-48.4/contact) +
2D Compatibility (PS) -50636 + (NN) -17732 + (LL) 3308
1D Compatibility (HY) -26000 + (ID) 6750
Total energy: -298253.0 ( -72.06 by residue)
QMean score : 0.449
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