Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYKIDDKQDQRLVNDTLNQIDIP-EGYILHSDQGSVYTSYAYYQLCEEKGIIRSMSRKGTPADNAPIESFHSSLKSETLYINNQLNSSNHIVIDIVEKYIKNYNNNQIQQKLGYLSPVKYRELIA
1C6V Chain:A ((92-202))
--------ETGRQTALFLLKLAGRWPITHLHTDNGANFASQEVKMVAWWAGIEHTFG-----------EAMNHHLKNQIDRIRE----QANSVETIVLMAVHCMNH-KRRGGIGDMTPAERLIN--
General information:
TITO was launched using:
RESULT:
Template:
1C6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8008 for 565 contacts (-14.2/contact) +
2D Compatibility (PS) -10529 + (NN) -2393 + (LL) 1180
1D Compatibility (HY) 800 + (ID) 950
Total energy: -19900.0 ( -35.22 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_1C6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C6V-query.scw
PDB file :
Tito_Scwrl_1C6V.pdb
: