Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKSSGGVFNNAAQIYNHDFYWDCLSPKA-TALSDELKEALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHVNWHFVSQCYEWAKKEGLGSVDYYINELVHKKA
3TQJ Chain:A ((2-193))
AFELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPFEKEPLEEIIRKSDGGIFNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLVKDN-NGKLEVLSTVNARNPMTEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNFWQVVNWDFVMKNFKS---------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111576 for 1526 contacts (-73.1/contact) +
2D Compatibility (PS) -19518 + (NN) -5490 + (LL) 1316
1D Compatibility (HY) -16000 + (ID) 4750
Total energy: -156018.0 ( -102.24 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3TQJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQJ-query.scw
PDB file :
Tito_Scwrl_3TQJ.pdb
: