Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQALSDGFKNALNKIRFQD--DEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKA-----GGIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKTKNK-KVLLCACDLQRLAAVEQLKVLGEQVGVEVFHEENK--SVKEIANNALKRAKEAQFDVLIVDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIG-VSGVVLSKFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFMPERIVGRLMGAGDIISLAEKTASVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDLESSLEVKKIKAMVNSMTKKERENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMAKRLTNKKGISDLMNLMSQAKNQTPPKMR |
| 2V3C Chain:C ((2-428)) | -MDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEKTPKGLSKKEHIIKIVYEELVKLLGE-EAKKLELNPKKQNVILLVGIQGSGKTTTAAKLARYIQK-RGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKF--KKADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDLESLLEKAEDMVDEK-TEESIDAIMRGKFTLNELMTQLEAIENM------------------------LTE-AKIKKYKVIISSMTKEERENPKIIKASRIRRIARGSGTTENDVREVLRYYETTKNAIDKLH------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64148 for 3488 contacts (-18.4/contact) +
2D Compatibility (PS) -41776 + (NN) -14829 + (LL) 2664
1D Compatibility (HY) -27600 + (ID) 6550
Total energy: -152239.0 ( -43.65 by residue)
QMean score : 0.468
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