Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEHQKRSPFPKDFLWGSASAAYQIEGAWDADGKGKSVWDEYVRIPGTTFKGTNGDVAVDHYHRYKEDVKLMADAGLKAYRFSIAWTRIFPNGKGEVNEAGLQFYDNLIDELLKYDIEPLVTLYHWDIPQALFDEYGGWESRQVIEDFTNYSTTLFKRYGDRVKYWVSLNEQNIFVGMGYGQALHPPKVSDPKRMYAVNHIANLANASVIKAFHEIVPDGKIGPSFAYTPHYPIDTD-PKNVQAADDAEELNSYFWMDMYAFGRYPKAVWKYLEENDIAPVIEDGDMELLASAKPDFMGVNYYQSATVAYNPLDGVGQNNEMNFT-GKKGSTKETGVPGVYKKVVNPFVKTTNWDWTIDPKGLQIALRRINSRYA-L-PILITENGLGEFDKLV-DGEVNDDYRIDYLSAHATAIRDAISDGVDMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDVEDDAPMTRIPKKSYYWYKQVIETNGADL |
3W53 Chain:A ((41-504)) | ----QKFAWPKEFLWGSATAAAQIEGAGHSYGKEDSVWDAFARKEGAIAGGENLEVAVDHYHRYREDVQLMRELGLDSYRFSTSWARVVPGG-RTVNPEGLDFYSRLVDELLENGILPWLTLYHWDLPQALEE-RGGWTNRETSYKFLEYAETVHEKLGDRVKHWTTFNEPLCSSLIGYAAGEHAPGRQEPQAALAAVHHQHLAHGLATARLRELGA-EHIGITLNLTNAVPNNPGDPVDLEAARRVDALWNRMYLDPVLRGSYPEDLLEDVQGLGLAEVIEAGDLEIISQP-IDFLGVNHYHDDNVSGHPLPAGQP---QPVVPTDSPKSS-PFVGSEYVTFPARDLPRTAMGWEVNPEGLRVLLNRLNQDYANLPSLYITENGASYTDTVTEAGTVEDPEREEYILNHLDAVVRAIADGVDVRGYFVWSLLDNFEWAWGYAKRFGIIHVDYQT-----QVRTIKNSGKAYAGLIAANRT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182964 for 4157 contacts (-44.0/contact) +
2D Compatibility (PS) -49232 + (NN) -17406 + (LL) 736
1D Compatibility (HY) -26400 + (ID) 8800
Total energy: -284066.0 ( -68.33 by residue)
QMean score : 0.506
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