Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVEDGKLVADDKAGTELLTFMSELQKNKLLLASKATD----PFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVP---YSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE--- |
2UVH Chain:A ((5-408)) | --------------------------------EVNLRMSWWG--GNGRHQVTLKALEEFHKQHPNINVKAEYTG-WDGHLSRLTTQIAGGTEPDVM-QTNWNWLPIFSKDGTGFYN--LFSVKEQLDLAQFDPKELQQTTVNGKLNGIPISVTARIFYFNDATWAKAGLE-YPKTWDELLAAGKVFKEKLGDQYYP----VVLEHQDTLALIRSYMTQKYNIPTIDEANKKFAYSPEQWVEFFTMYKTMVDNHVMPSTKYYASFGKSNMYEMKPWINGEWAGTYMWNSTITKYSDNLTKPAKLVLGPYPMLPGAKDAGLFFKPAQMLSIGKSTKHPQESAMLINFLLNS-KEGVEALGLERGVPLSATAVTQLRASGVIKDEDPSVAGLNMALELPHKMTTSPYFDDPQIVSLF-GDAIQYIDYGQKTVQETAEYFNKQGDRILKRAMR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2UVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -30926 for 3381 contacts (-9.1/contact) +
2D Compatibility (PS) -42265 + (NN) -19240 + (LL) 1924
1D Compatibility (HY) -6400 + (ID) 2500
Total energy: -99407.0 ( -29.40 by residue)
QMean score : 0.349
|
|
|