Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKYDDKHFFEQYSQMPRSKEGLQAAGEWHEFKKLLPDFHQKVVLDLGCGFGWHCIYAAEQGAKKVVGVDLSARMLTEAKHKTT---SPIVHYERRAMENIDIEPETYDIVLSSLALHYVASFNDICQKVNTNLITGGSFVFSVEHPIFTADGRQDWFTDEAGNKLHWPVDRYFNESIRTSHFLGEDVQKYHRTLTTYIQTLLKNGFQINSIIEPEPAPELKDLPEMQDEYRRPMMLIISATKN
2YQZ Chain:A ((38-196))
----------------------------------------GEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGVDRK-VQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQAEASPEWT---------------LQERWRAFAAEEGF-PVERGLHAKRLKEVEEALRRLGLKPRTREVA-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88385 for 1060 contacts (-83.4/contact) +
2D Compatibility (PS) -16687 + (NN) -2892 + (LL) 5516
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -108498.0 ( -102.36 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_2YQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YQZ-query.scw
PDB file :
Tito_Scwrl_2YQZ.pdb
: