Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQRDLAEKTANPIEATHWVFYNETQAGDAIGDKVRSS-I----MV------RYREEKFVVHYNVSDFQFVTVFDVATAFKDQLEQALNA
2P5Z Chain:X ((121-259))
-------------------------------------------------------NAIY-QNQTVPQIVEKILRERHQMRGQDFVFNLKSEYPAREQVMQYGEDDLTFVSRL----------------
General information:
TITO was launched using:
RESULT:
Template:
2P5Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18313 for 250 contacts (-73.3/contact) +
2D Compatibility (PS) -4711 + (NN) 384 + (LL) 5920
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -19870.0 ( -79.48 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_2P5Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5Z-query.scw
PDB file :
Tito_Scwrl_2P5Z.pdb
: