Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGRKTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEPIYIVGGAEIYRLFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
2W9H Chain:A ((2-158))
TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQL---PGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK
General information:
TITO was launched using:
RESULT:
Template:
2W9H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100681 for 1154 contacts (-87.2/contact) +
2D Compatibility (PS) -16561 + (NN) -3964 + (LL) 300
1D Compatibility (HY) -15600 + (ID) 3000
Total energy: -139506.0 ( -120.89 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_2W9H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W9H-query.scw
PDB file :
Tito_Scwrl_2W9H.pdb
: